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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 46 23

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 278 80

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 473 199

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 139 87

Repositories

Showing 10 of 115 repositories
  • jbrowse-plugin-msaview Public

    multiple sequence alignment browser plugin for JBrowse 2

    GMOD/jbrowse-plugin-msaview’s past year of commit activity
    TypeScript 6 Apache-2.0 0 6 0 Updated Apr 6, 2026
  • jbrowse-plugin-protein3d Public

    3D protein structure visualizer in jbrowse 2 - WIP

    GMOD/jbrowse-plugin-protein3d’s past year of commit activity
    TypeScript 0 0 6 0 Updated Apr 6, 2026
  • jb2hubs Public

    Source code for the JBrowse 2 genome hubs webite and data processing scripts

    GMOD/jb2hubs’s past year of commit activity
    TypeScript 0 0 32 2 Updated Apr 6, 2026
  • JBrowseMSA Public

    A multiple sequence alignment viewer

    GMOD/JBrowseMSA’s past year of commit activity
    TypeScript 25 MIT 3 24 0 Updated Apr 6, 2026
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 278 Apache-2.0 80 178 (2 issues need help) 16 Updated Apr 6, 2026
  • bbi-js Public

    Parser for bigwig and bigbed files

    GMOD/bbi-js’s past year of commit activity
    TypeScript 8 MIT 6 3 0 Updated Apr 4, 2026
  • Apollo3 Public

    JBrowse 2 plugin for editing annotations on an Apollo server

    GMOD/Apollo3’s past year of commit activity
    TypeScript 15 Apache-2.0 9 72 2 Updated Apr 2, 2026
  • twobit-js Public

    Read .2bit files with pure JS. Works in node or webpack.

    GMOD/twobit-js’s past year of commit activity
    TypeScript 4 MIT 1 0 1 Updated Mar 31, 2026
  • indexedfasta-js Public

    Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi

    GMOD/indexedfasta-js’s past year of commit activity
    TypeScript 12 MIT 3 0 0 Updated Mar 31, 2026
  • nclist-js Public

    Read JBrowse v1 nested containment list feature stores from modern JS

    GMOD/nclist-js’s past year of commit activity
    TypeScript 0 MIT 0 0 1 Updated Mar 31, 2026
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