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2.1.0 connect 2026 #10 MNVs#691

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jdeligt wants to merge 13 commits intov2from
2.1.0-connect_2026_#10
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2.1.0 connect 2026 #10 MNVs#691
jdeligt wants to merge 13 commits intov2from
2.1.0-connect_2026_#10

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@jdeligt jdeligt commented Apr 13, 2026

Adding first MNV set
@larrybabb

jdeligt added 3 commits April 13, 2026 16:38
Copying allele entries over from models over to a seperate file to add more validation use cases
Adding first MNV (HGSV style)
Adding c.notation MNV
jdeligt and others added 10 commits April 13, 2026 17:48
Adding 3 prime UTR examples
Adding copynumber validations file
Adding to-do section
Merge upstream insertion test cases (INS 1-5) with local allele
validation entries (MNV, UTR, deletion examples). Fix YAML indentation
issues from conflict resolution.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
The 20bp insertion test case (NC_000001.11:156114976:CGCTGTCGCCCA:...)
had start=156114988 and end=156114976, which is inverted. Start should
be less than or equal to end in interbase coordinates.
adding missing repeat length
fixing typo
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4 participants